SE3220172

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8283
  • Prunus persica
  • SE3220172
  • Mutator
  • PrpM42
  • scaffold_6:11402192-11402359
  • GTGATGTTG
  • GATGTTGGAGAAAAACTTAGTTGCAATAGGGATAACACTATTTTGCTATCCCTGGCCAATAATACTATGCCACGTGGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
GT      -G      AA   AGT  C                     C   C CT  C       A     C  C   GA GTG
  GATGTT  GAGAAA  CTT   TG AATAGGGATAACACTATTTTG TAT C  GG CAATAAT CTATG CA GTG  A   
  ||||||  ||||||  |||   || ||||||||||||||||||||| ||| |  || ||||||| ||||| || |||  |    
  TTGTAG  CTCTTT  GAA   AC TTATCCCTATTGTGATAAAAT ATA G  CC GTTATTG GATAC GT CGC  T   
 G      TA      CC   GGT  T                     T   A AT  A       C     T  A   AT ATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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