SE3820007

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8325
  • Solanum tuberosum
  • SE3820007
  • Mutator
  • M4
  • chr09:46083677-46083908
  • TCCAAAAAT
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
TCCAAAAATG    ATGCTAAATGGCCATAAAATTTGGTTAGAAATTTAAAAAATCGATAATATCTTTTTTATTTTACAATAAACTGATCTTTTTTCTATTATTTAATTAAAAGATA
          GGTA                                                                                                       
          ||||                                                                                                        
          TCCT                                                                                                       
  TAAAAACC    TTTTAGGAAAACCGTTTCTTTTAACCGGTTTTAAACCAGTCTTACCATAAAATAGATATAATAAAATAAAATAAAAACTTATAAAAATGGGAAAATTGAAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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