SE3830157

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8475
  • Solanum tuberosum
  • SE3830157
  • hAT
  • Hat19
  • chr06:48777240-48777376
  • GATTATAC
  • CCTAAGTTGCACGGACTCTTCACTTTCGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
GATTATA    A     A           ---CTT      CCGCACC                AAAATAC
       CCTA GTTGC CGGACTCTTCA      TCGATG       CGTGTCGGATTCTCCA       
       |||| ||||| |||||||||||      ||||||       ||||||||||||||||       A
       GGAT CAACG GCCTGAGAAGT      AGTTGC       GCACAGCCTAAGAGGT       
CATATTA    A     A           TTTTAC      ---CCAC                CTTCATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3