SE3830233

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8551
  • Solanum tuberosum
  • SE3830233
  • hAT
  • Hat19
  • chr04:7946376-7946512
  • CTTGAAAT
  • CTAAGTTGCTCGGACTCTCCAAAAATGTTGCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTGAAAT   A              C          G   CATAC      A     C     ATAA
        CTA GTTGCTCGGACTCT CAAAAATGTT CCG     GTGTCG ATCCT CAAAA    
        ||| |||||||||||||| |||||||||| |||     |||||| ||||| |||||    A
        GAT CAACGAGCCTGAGA GTTTTTACAG GGT     CACAGC TAGGA GTTTT    
TAAAGTTC   A              A          G   CCACT      C     A     CATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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