SE3830290

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8608
  • Solanum tuberosum
  • SE3830290
  • hAT
  • Hat19
  • chr03:27549866-27550003
  • ACTTATCA
  • CTAAGTTGCTCGGACTCTCCAAAAATGTTGCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
ACTTATCAA   A              C           C  CACC                      C
         CTA GTTGCTCGGACTCT CAAAAATGTTG CG    CGTGTTGGATCCTTCAAAAATA 
         ||| |||||||||||||| ||||||||||| ||    |||||||||||||||||||||| A
         GAT CAACGAGCCTGAGA GTTTTTACAGC GC    GTACAGCCTAGGAGGTTTTTAT 
 AACTATTC   A              A           T  CCAC                      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3