SE3840398

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8716
  • Solanum tuberosum
  • SE3840398
  • CACTA
  • Ca2
  • chr09:1119350-1119494
  • TTC
  • CACTACAAGAAAAGGGTGAATTACATGGGGATTTTTCCTTGGGGATTAGTATGAAAATTTGCAGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTC       A     GG                    T   T                            AT
   CACTACA GAAAA  GTGAATTACATGGGGATTTT CCT GGGGATTAGTATGAAAATTTGCAGGAAA  
   ||||||| |||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||  A
   GTGATGT CTTTT  CACTTAATGTACCCCTAAAA GGA TCCCTAATCATACTTTTAGGCGTCCTTT  
CTT       A     GA                    -   -                            GA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3