SE3830407

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8725
  • Solanum tuberosum
  • SE3830407
  • hAT
  • Hat19
  • chr08:36673927-36674063
  • GTGTAAAT
  • ATCTAAGTTGCTCGGACTCTCCAAAAATGTTGCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
GTGTAA     A              C           C  CACCCA   C                C
      ATCTA GTTGCTCGGACTCT CAAAAATGTTG CG      TGT GGATCCTTTAAAAATA 
      ||||| |||||||||||||| ||||||||||| ||      ||| |||||||||||||||| A
      TGGAT CAACGAGCCTGAGA GTTTTTACAAC GC      ACA TCTAGGAGGTTTTTAT 
TAAAAG     A              A           T  CCACGC   A                C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3