SE3830428

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8746
  • Solanum tuberosum
  • SE3830428
  • hAT
  • Hat19
  • chr10:2199738-2199873
  • GCTAACAC
  • CCTATGTGGCTCGGACTCTTCAAAAATGTCTATGGGTGCATGTCGGATACTACAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
GCTAACA       G                 A   CTA  G  G A        A  A     GTAG
       CCTATGT GCTCGGACTCTTCAAAA TGT   TG GT C TGTCGGAT CT CAAAA    
       ||||||| ||||||||||||||||| |||   || || | |||||||| || |||||     
       GGATACA CGGGCCTGAGAGGTTTT ACA   GC TG G ACAGCCTA GA GTTTT    
CACAATC       A                 A   ACG  G  G C        A  A     ACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3