SE3830474

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8792
  • Solanum tuberosum
  • SE3830474
  • hAT
  • Hat57
  • PGSC0003DMB000000884:15897-16034
  • GATGGGAT
  • GATGGGATCTATGTTGCTCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
   GGG    -AT          CTATTA        CA   GGTG       A      T      AT
GAT   ATCT   GTTGCTCGGA      AAAAATGT  TCA    TGTGTCG ATTCTT AAAAAT  
|||   ||||   ||||||||||      ||||||||  |||    ||||||| |||||| ||||||  T
CTA   TAGG   CAACGAGCTT      TTTTTATA  AGT    ATACAGT TAAGAA TTTTTA  
   GGG    ATT          AAGAAG        AC   ATGA       C      T      CG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3