SE3820511

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8829
  • Solanum tuberosum
  • SE3820511
  • Mutator
  • M50
  • chr10:364366-364529
  • CTAGTCATC
  • GGGTTAATACCTCAGATGATCACTCAACTATCCAGTCTTTCCTCAGAAAGTCACTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTAGTCATCA                  A               G C  T                 CATGGTG      T   GA
          GGGTTAATACCTCAGATG TCACTCAACTATCCA T TT CCTCAGAAAGTCACTCA       ACTTTT AGT  
          |||||||||||||||||| ||||||||||||||| | || |||||||||||||||||       |||||| |||   
          CCCAATTATGGAGTCTAC AGTGAGTTGATAGGT A AA GGAGTCTTTCAGTGAGT       TGAAAA TTA  
ACTACCTATC                  C               G A  C                 -------      -   AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3