SE3830513

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8831
  • Solanum tuberosum
  • SE3830513
  • hAT
  • Hat19
  • chr06:35798865-35798999
  • GGATAGGG
  • CTATGTTGCTCGGACTCTTCAAAAATGTCTACGGGTGCATGTCGGATACTACAGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
GGATAGGG                        A   CTA  G  G A     G  A  A     GTAG
        CTATGTTGCTCGGACTCTTCAAAA TGT   CG GT C TGTCG AT CT CAGAA    
        |||||||||||||||||||||||| |||   || || | ||||| || || |||||     
        GATACAACGAGCCTGAGAGGTTTT ACA   GC TG G ACAGC TA GA GTTTT    
GGGATAGG                        A   ACG  G  G C     -  A  A     ACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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