SE3810593

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8911
  • Solanum tuberosum
  • SE3810593
  • Tc1/Mariner
  • St3
  • chr02:67260305-67260571
  • TA
  • TACTCCCTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
          -A    -      ATTGTCCACTATTAACTTGACACACCCCTTAAGAAACTATAAATAAAAAGGTAATTTTACTATATCACCCTTTGAATATAATAAACACAATGTCTTGAAAAATGTAATAAG
TACTCCCTCT  TCCA ACAATA                                                                                                               
||||||||||  |||| ||||||                                                                                                               G
ATGAGGGAGG  GGTT TTATCA                                                                                                               
          CA    G      ACAAATCATATGATAAAACCCTACAGGTTGTTATGAACAGGTGAAATACTTTAGTTACCTATTAAAATGTGAATCAAGAATTAAATGGGAATAGTAATTAATATCAGTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3