SE3840628

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8946
  • Solanum tuberosum
  • SE3840628
  • CACTA
  • Ca2
  • chr04:41180277-41180419
  • TGA
  • ACACTACAAGAAAAGTGTGAATTACATGGGGATTTTCCTGGGGATTAGTATGAAAATCCGTAGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TG                        C               G                CC        CT
  ACACTACAAGAAAAGTGTGAATTA ATGGGGATTTTCCTG GGATTAGTATGAAAAT  GTAGGAAA  
  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||  T
  TGTGATGTTCTTTTCACACTTAAT TACCCCTAAAAGGAC CCTAATCATACTTTTA  CGTCTTTT  
AG                        A               A                AA        TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3