SE3830657

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8975
  • Solanum tuberosum
  • SE3830657
  • hAT
  • Hat19
  • chr08:34784363-34784499
  • AAAGAAAT
  • TCTATGTTGCTCAGACTCTTCAAAAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAGAAA    T       A               CCGA  A  G     T       C        G
       TCTA GTTGCTC GACTCTTCAAAAATG    CG GC CGTGT GGATCCT CAAAAATA 
       |||| ||||||| |||||||||||||||    || || ||||| ||||||| |||||||| T
       AGAT CAACGAG CTGAGAGGTTTTTAC    GC TG GCGCA CCTAGGA GTTTTTAT 
TAAAGAA    T       C               AACG  G  G     T       A        G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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