SE2160006

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8990
  • physcomitrella Patens
  • SE2160006
  • Micron
  • Mim3
  • scaffold_19:1192617-1192827
  • ATATATA
  • TATATATAGGGAATTGTTAAATTGACCCATGTATTTACTAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
         A                       GAC   TGT            GTTGTCCC     T G         AAACAT     AGGTGAGATCCGCATTGATCAAAAA
          TATATATAGGGAATTGTTAAATT   CCA   ATTTACTAAATT        TATCC A CCATCATCA      TCTCA                         
          |||||||||||||||||||||||   |||   ||||||||||||        ||||| | |||||||||      |||||                          
          ATATATATCCCTTAGCAATTTAA   GGT   TAAATGATTTAA        ATAGG T GGTAGTAGT      ACCAA                         
AGATATATAC                       ATA   TTT            --------     - G         -----A     ATACTAGGTTGGTAAAATAGTAACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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