SE2850019

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9024
  • Sorghum bicolor
  • SE2850019
  • PIF/harbinger
  • To3
  • chromosome_2:58401890-58402138
  • TAA
  • AGGCCTTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA           --         ------    GAAAAGTTTTCGGAACTGTAGCACTTTTGTTTTTATTTGACAAACATTATTTAATCATAGAGTAACTAGGCTTAAAATATTCATCTCGTGATTT
  AGGCCTTGTTT  AGTTCCGAA      AACT                                                                                              
  |||||||||||  |||||||||      ||||                                                                                              A
  TCCGGAACAAA  AAGTGGGGT      TTTT                                                                                              
AA           TG         TTTTGG    AGAAAAGTTCTAAGGGGCAGTGTAGCTTAGAATGCGATGTACGTAACTCATAATTTATATTTGTTTTTATTTTTGATTAACGTGTCAAATGGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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