SE2810038

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9043
  • Sorghum bicolor
  • SE2810038
  • Tc1/Mariner
  • St6
  • chromosome_6:50024050-50024310
  • TA
  • TACTCCCTCCGTCCACGAAAGAGTCAATTTCTAGAGTTGTCCTAAGTCAAACTTTTTAAACTTTGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                                  A TT    ---TA                C      CAAA   C       -AAAT  T  G           C    TA       TA  TTCATCATA
TACTCCCTCCGTCCACGAAAGAGTCAATTTCTAG G  GTCC     AGTCAAACTTTTTAAA TTTGAC    TTT TAGAAAA     GC AA ATTTATAGTAT AAAT  GTATTAT  GA         
|||||||||||||||||||||||||||||||||| |  ||||     |||||||||||||||| ||||||    ||| |||||||     || || ||||||||||| ||||  |||||||  ||         G
ATGAGGGAGGCAGGTGCTTTCTTAGTTAAGGATC C  TAGG     TCAGTTTGAAAAATTT AAACTG    AAA ATCTTTT     TG TT TAGATATTATA TTTA  TGTAATA  CT         
                                  - --    CACAG                C      ATTG   T       CTCAT  -  G           T    CG       TA  TTTATATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3