SE2850041

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9046
  • Sorghum bicolor
  • SE2850041
  • PIF/harbinger
  • To1
  • chromosome_3:2463824-2464072
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                ACCCC    TTCAAAAAGTTTTCAAGATTCTCCGTCACATCGAATCTTGCGGCACATGCATGAAGCATTAAATATAGACGAAAATAAAAACTAATTACACAGTTTGTCT
  AGGCCTTGTTTAGTTC     GAAA                                                                                                    
  ||||||||||||||||     ||||                                                                                                     
  TCCGGAACAAATCAAG     GCTT                                                                                                    
AT                -----    TTTTAAAGCCTAAAGCGATGACATCGTGAAAGCAAAAATAAACTATTTATAACAGATTAGTACTTAATTGATCCTAGTTTTCTAAGTAGAGCGCTAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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