SE2850049

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9054
  • Sorghum bicolor
  • SE2850049
  • PIF/harbinger
  • To4
  • chromosome_7:36571306-36571553
  • TAA
  • AGGCCTTGTTTAGTTGGTGAAAATTTTTTGGGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               GGT     T           -   T  -  TAGCACTTTCATTTGTATTTGACAATTATTGTCTAATCATGGATTCACTAGGTTCAAAAAATTTGTCTCGCAAATTAC
  AGGCCTTGTTTAGTT   GAAAA TTTTTGGGTTT GGC AC TG                                                                              
  |||||||||||||||   ||||| ||||||||||| ||| || ||                                                                              A
  TCCGGGACAAATCAA   TTTTT AAAGATTTAAA AAG TT CA                                                                              
AA               GGG     T           A   -  C  AAAGAGTGTAGCTTAGAAACCTCCGTACGTACCTCGTAATTTATATTTATTTTTTTTATTGATTAACGTGTCAAACAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3