SE2850055

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9060
  • Sorghum bicolor
  • SE2850055
  • PIF/harbinger
  • To14
  • chromosome_10:33692043-33692291
  • TTA
  • AGGCCTTGTTTACTTCTAAATTTTTTTGCAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            -C       TTT           --------AT     GT   ATTTTCGTTTGTATTTGATAAATATTGTCCAATTATGGACTAACTAGACTCAAAAGATTCATCTCGCAAATTA
  AGGCCTTGTTTA  TTCTAAA   TTTTGCAAAAT          GAATA  AGC                                                                         
  ||||||||||||  |||||||   |||||||||||          |||||  |||                                                                          
  TCCGGAACAAAT  AGGATTT   AAAACGTTTTA          GAGGT  AGT                                                                         
AT            CA       TAT           AAAAGTGTAA     --   GTAGCTTAAAATGCCGTGTACGTACCTCGTGATTTATATCTATTTTCTTTATTGATTAATGTGTTAAATAGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3