SE2810062

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9067
  • Sorghum bicolor
  • SE2810062
  • Tc1/Mariner
  • St8
  • chromosome_7:56821370-56821523
  • TA
  • TACTCCCTCCATTCCAAATTATAAGACGTTTTGGCTTTTCTACATACATAGTTTTTGCTATGAATTTAGATATACATTATGTCTATATACATAATAAAAGCAATGTATGTAGAAAAGCCAAAACGTCTTATAATTTGGAACGAAGGAAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
       C   C A                                      A       C    A  T        C
   TACT CCT C TTCCAAATTATAAGACGTTTTGGCTTTTCTACATACAT GTTTTTG TATG AT TAGATATA 
   |||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||| |||| || |||||||| A
   ATGA GGA G AAGGTTTAATATTCTGCAAAACCGAAAAGATGTATGTA CGAAAAT ATAC TA ATCTGTAT 
ATC    A   A C                                      A       A    A  T        T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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