SE2850088

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9093
  • Sorghum bicolor
  • SE2850088
  • PIF/harbinger
  • To1
  • chromosome_2:23940104-23940360
  • CAG
  • C

Secondary structure and sequence

TSD    TIR
5'



3' 
     TTTCAGCCCTGTTTAATTTAGGCCTTGTTTAGTTGGGAAAAATTTTGGATTTCGCCACTGTAGCACTTTCGTTTGTTTGTGATAAATATTATCCAATTATAGACTAACTATGATCAAAAGATTC
  CAG                                                                                                                            
  |||                                                                                                                            G
  TCC                                                                                                                            
AT   GGAACAAATCAACGGTTTTTAAAAGTTCTAAGGGGCAGTGTAGCTTAGAACGCCGTGTACGTACTTCGTAATTTATATCTTCTTTTGTTTTTGATTAATACGTCAAATGGACATTTAGTGCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3