SE2850103

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9108
  • Sorghum bicolor
  • SE2850103
  • PIF/harbinger
  • To23
  • chromosome_6:6135393-6135693
  • TTA
  • AGGGGGTGTTTAGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                AAAAAAATGCAAAATG    CTACTTTGGAATGATGGAATTCAAAATGCCAAAATTTTTAGGGTCATGTTTAGTTCCATCCAAAATACATAATTTACTGCCCTCATGAGGGCCTCTTGAGGCTCTTTTGGGTTTTTCTTT
  AGGGGGTGTTTAGTTT                CCAA                                                                                                                        
  ||||||||||||||||                ||||                                                                                                                         
  TCCCCCACAAATCAAA                GGAA                                                                                                                        
AT                ---------------G    GATAAGGTTTTAAAAAAAACCCAAAACTAAGTAGTAAAATGTTTTATCTTGATTTGTGGTACGTTTTTAAAACCGTTTTTCTACCAATAAGAGGTAAAACTTAAAACCGGAGTTCTCCGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3