SE2850104

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9109
  • Sorghum bicolor
  • SE2850104
  • PIF/harbinger
  • To1
  • chromosome_3:2463824-2464072
  • TAA
  • AGGCCTTGTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                     AAATTTCGGATTTCGCTACTGTAGCACTTTCGTTTTTATTTGATAAATATTGTCTAATCATGAATTAACTAGGATCAAAAGATTCATCTCGCGATTTACAG
  AGGCCTTGTTTAGTTCCGAAA                                                                                                     
  |||||||||||||||||||||                                                                                                     A
  TCCGGAACAAATCAAGTGGGG                                                                                                     
AA                     CTTTAAGTTTTTCAAAAGTTCTAAGAGGCAGTGTAGCTTAGAACGCCGTGTACGTACTTCGTAATTTATATCTGCTTTTATTTTTGATTAATGTGTCAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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