SE2850138

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9143
  • Sorghum bicolor
  • SE2850138
  • PIF/harbinger
  • To14
  • chromosome_5:56198200-56198449
  • TTA
  • AGGCCTTGTTTAGTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 CAAAATA           --------------TTCTC     TCCCATCACATATAATCTTGCGGCACATACATGAATCAATAAATATAGATAAAAGAAATAAATAATTACAC
  AGGCCTTGTTTAGTTCC       TTTTGTAAAAT                   AGATT                                                                       
  |||||||||||||||||       |||||||||||                   |||||                                                                        
  TCCGGAACAAATCAAGG       AAAACGTTTTA                   AAACA                                                                       
AT                 TTTAAAA           TCCTTATCATCGTAAAAGC     TAAACTGTTTATAACAGGCTAGTACCTGATTGATCCGAGTTTTCTAAACAGAGCATTTAATGTCTATCTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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