SE2830164

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9169
  • Sorghum bicolor
  • SE2830164
  • hAT
  • Hat13
  • chromosome_8:3841058-3841241
  • GCCAACGC
  • GCCAGTGGCGGATCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
GCCAAC                ------AA   GGGCTGGGTGGGCTCCAGCCCCCCCTATAAGTATGATTTGTCCATTAGATTAGGGTTAATTA
      GCCAGTGGCGGATCCA        GGG                                                              
      ||||||||||||||||        |||                                                               
      CGGTCACCGCCTAGGT        CGG                                                              
CGCAAC                CCTACTTC   TTCCCCCCCCGATTTGTCATTTGAATATCCCAATTTCGATCTTTAATTATTTTTAAATTCTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3