SE2850169

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9174
  • Sorghum bicolor
  • SE2850169
  • PIF/harbinger
  • To32
  • chromosome_5:2025620-2025772
  • GAA
  • GGGCTAATTTGGAAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
GAA                --AAG   GAGGCACACCCAGGGATGGAAAACGCTCCAAGAACTAAATAATTATTCAA
   GGGCTAATTTGGAAGC     GGG                                                  
   ||||||||||||||||     |||                                                  A
   TCCGATTAAACCTTTG     AGG                                                  
AAG                AGTTT   GGAAACCTAGGGACTGAAAAAGGTCCTACCCTTTAGGTACCCCCTTTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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