SE2830216

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9221
  • Sorghum bicolor
  • SE2830216
  • hAT
  • Hat17
  • chromosome_2:65704384-65704698
  • GATAGCAC
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
GATA  ACTAAGGATGAAAACGGTCGGAAACGGTCGAAAACGGAATTACAATGTAGAAAACGAAAGCGGTCGGTACGGAATATTTCTATATTTTAGCAATTAAAGAGTACAAAAAAAGAATAAAAATGGTTGTGAAACCAACTGAAACTGACAAATTT
    GC                                                                                                                                                        
    ||                                                                                                                                                         
    CG                                                                                                                                                        
 ATA  AAAACACGAGACGAGACGAGTCAAACAACACCAACACACGATAGATTCCTACTTTTGCCTTGCCTTTATAAGGCATGGCTGGCGAAAGCAAAAGATGTAATACTATAGCAAAAGATATAATACTTTGACAAAAGCTTAAAACAGTTTGTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3