SE2830233

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9238
  • Sorghum bicolor
  • SE2830233
  • hAT
  • Hat9
  • chromosome_9:2971228-2971508
  • GGTGCTAT
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
GGT -   TCAGTGGCGGACCCAGAAACGGACCAAGAGGGGAGCTAAATAATATAGCTAAATTTTTTTTGCTCGCTCAATCCAGTACACTAATAGATATAGCTAAGATTGATAATTCAATATTGATTCAAAGTGCTCAAAA
   G CTA                                                                                                                                     
   | |||                                                                                                                                      
   C TGG                                                                                                                                     
TAT G   GTAACCGCCTGAGTCCCCCCGATCCCACCGACGTCGGGGGGAGAACCTGAGTTTTAAAAAAATTGTCTAAAAGAAAAATCGTTTTCTGAGATACATAAACCATAAAAAGATACAAATAGAATACTTAGAAACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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