SE2810251

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9256
  • Sorghum bicolor
  • SE2810251
  • Tc1/Mariner
  • St16
  • chromosome_3:63464778-63464927
  • TA
  • TACTCCCTCCGTTCTAAATTATAAGTCGCTTGACTTTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
         C                     -         TTTA     AGAA     A           C   C
TACTCCCTC GTTCTAAATTATAAGTCGCTT GACTTTTTT    TACAT    TTTGC ATGTATCTAGA ATA 
||||||||| ||||||||||||||||||||| |||||||||    |||||    ||||| ||||||||||| ||| A
ATGAGGGAG CAAGGTTTAATATTCAGTGAA CTGAAAAAA    ATGTA    AAACG TACGTAGATCT TAT 
         A                     A         --CC     GGTA     A           A   T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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