SE2850255

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9260
  • Sorghum bicolor
  • SE2850255
  • PIF/harbinger
  • To40
  • chromosome_3:71193556-71193687
  • TAA
  • AGGCTCTGTTCGTTTCTTATGGAATGGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   C           --   A   -AA      --C    AATGATTCCAGTCAAGAATGTTGTGTA
  AGG TCTGTTCGTTT  CTT TGG   TGGATG   CTGG                           
  ||| |||||||||||  ||| |||   ||||||   ||||                            
  TCC AGGTAAGCAAA  GAG ACC   GCCTAC   AGTA                           
AA   C           TC   -   AAG      TTA    AAGTCTACTAGTTTTTATTGTATTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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