SE2810267

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9272
  • Sorghum bicolor
  • SE2810267
  • Tc1/Mariner
  • St16
  • chromosome_8:47517404-47517552
  • TA
  • TACTCCCTCCGTTCCAAATTATAAGTCGCTTTGACTTTTTTGGTTCATCCATTTTGCTATGTATCTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
           T             T                  TC                  C    CATAT
TACTCCCTCCG TCCAAATTATAAG CGCTTTGACTTTTTTGGT  ATCCATTTTGCTATGTAT TAGA     
||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||     T
ATGAGGGAGGT AGGTTTAATATTC GCGAAACTGAAAAAACCA  TAGGTAAAATGATACATA ATCT     
           T             C                  TA                  A    ATTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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