SE2850295

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9300
  • Sorghum bicolor
  • SE2850295
  • PIF/harbinger
  • To4
  • chromosome_6:58314782-58315018
  • TAA
  • AGGCCTTGTTTAGTTCGCAAAAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   C                        -----AA   T TCCGTCACATCGAATCTTTAGTCGCATGAATGGAGCATTAAATATAGACGAAAATAAAAACTAACTGCACAGTTTACCT
  AGG CTTGTTTAGTTCGCAAAAATTTTT       AAT T                                                                               
  ||| ||||||||||||||||||||||||       ||| |                                                                               G
  TCC GAACAAATCAAGCGTTTTTAAAAA       CGA T                                                                               
AA   A                        CAAAAAC   - GACATCGTAAAGCAAAAATAAACTGTTTATAACAGGTTAGTGCCTCATTGATCTGAATTTTCTAAGTAGAGTGTTTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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