SE2850305

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9310
  • Sorghum bicolor
  • SE2850305
  • PIF/harbinger
  • To42
  • chromosome_7:37574994-37575126
  • TTA
  • AGGGCCCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     C   TCTGTTTACGATGATT      -  AAACTCTTCCT GTGATTGTTAGCTGTGTAAAATACAACAATGA
  AGGGC CGT                TTCGGC CA           G                                
  ||||| |||                |||||| ||           |                                 
  TCCCG GCA                GCCAAG TT           G                                
AT     T   ---------------T      G  ----------- CCTTAGATCACGAGCTTGGCTAGGCCGGTCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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