SE2850336

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9341
  • Sorghum bicolor
  • SE2850336
  • PIF/harbinger
  • To1
  • chromosome_7:61390351-61390600
  • TTA
  • AGGCCTTGTTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               ACACCCAAAAACCCAAAACTTTA     TTTCCTGTCACATCGAATCTTGCGGCACATGCATGAAGTATTAAATATAGATAAAAATAATAACTAATTGCACAGTTTACCTGTAAATCAC
  AGGCCTTGTTTAGAT                       CAAGA                                                                                           
  |||||||||||||||                       |||||                                                                                            
  TCCGGAACAAATCTA                       GTTTT                                                                                           
AT               ----------------------C     TAAAAAAACCTAAAACTGTGACATCGTAAAAGCAAAAATAAACTGTTTGTAACAGATTAATATCTCATTGATACAAATTTTCTAAGCAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3