SE2850345

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9350
  • Sorghum bicolor
  • SE2850345
  • PIF/harbinger
  • To1
  • chromosome_9:54048913-54049161
  • AGA
  • GGCCTTGTTTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
AGA             --          TTTCAGTTTTCGGAACTGTAACACTTTCGTTTTTATTTGACAAACATTATCCAATCATAGAGTAACTAGGTTTAAAAGATTCATCTCGTGATTTACA
   GGCCTTGTTTAGT  TCCGAAAACT                                                                                                 
   |||||||||||||  ||||||||||                                                                                                 G
   CCGGAACAAATCG  TGGGATTTTT                                                                                                 
AGA             AG          GGTTTTAGAAAAGTTCTAAGAGGCAGTGTAGCTTAGAATGCAGTGTACGTACTTCATAATTTATATCTGTTTTTATTTTTGATTAATGTGTCAAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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