SE2850355

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9360
  • Sorghum bicolor
  • SE2850355
  • PIF/harbinger
  • To1
  • chromosome_8:50152745-50152994
  • TAA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    C                  ------------   GCAAAAAAATTTTCAAGATTCCCCGTCACATCGAATCTTGCGGCATATGCATGGGGTACTAAATATAGACGAAAATAAAAACTAATTGCAC
  AGGC TTGTTTAGTTCACCCCGA            AAA                                                                                           
  |||| ||||||||||||||||||            |||                                                                                            
  TCTG AACAAATCAAGGCTTTTG            CTT                                                                                           
AA    T                  AAAAACCAAAAA   TAACATCGTGAAAGCAAAAATAACCTGTTTGTAACAGATTAGTACCTCGTTGATCTTAATTTTTTAAGTAGAGTACTAAATGTCCATTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3