SE2850363

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9368
  • Sorghum bicolor
  • SE2850363
  • PIF/harbinger
  • To14
  • chromosome_5:10474608-10474855
  • TAA
  • AGGCCGTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     G         ----------CCC     -  TTTATAAAATTTTTTAGATTCTCCGTCACATCAAATCTTGCAGTACATGCATGGAGTATTATTAAATATAGATAAAAAATAACTAATTGCA
  AGGCC TGTTTAGTT             AAAAA AT                                                                                           
  ||||| |||||||||             ||||| ||                                                                                           C
  TCCGG ACAAATCAA             TTTAC TG                                                                                           
AA     A         AAAAAAAAAACGT     C  TAACATCGTGTAAGTAAACATAAACTGTTTATAACATATTAGTACCTGATTGATCCAAGTTTTCTAAACAGAGCGTTTAATATCCGTTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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