SE2850390

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9395
  • Sorghum bicolor
  • SE2850390
  • PIF/harbinger
  • To55
  • chromosome_2:51403538-51403670
  • TTA
  • AGGCTGCGTTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            TTTAG    TATTCCTGGCAGGAATCATTTCTGGTCAGAATTCGCTATGTAAA
  AGGCTGCGTTCG     TGTC                                            
  ||||||||||||     ||||                                            T
  TCCGACGCAAGC     CCGT                                            
AT            --CAA    CCCTAAGTACGGGACCTTGGCAAGGACGAGTTTTAGGAACACGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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