SE2850391

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9396
  • Sorghum bicolor
  • SE2850391
  • PIF/harbinger
  • To1
  • chromosome_4:58235700-58235948
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT             T  ACCCCGAAAACCAAAAACTTTT    ATTCTCCGTCACATCAAATCTTGCGGCACATGCATGGAACATTAAATATAGACGAAAACAAAAACTAACTACACAGTTTATCTATAAATCA
  AGGCCTTGTTTAG TC                      CAAG                                                                                           
  ||||||||||||| ||                      ||||                                                                                            
  TCCGGAACAAATC AG                      CTTT                                                                                           
AT             T  ---------------------A    TTTAAAGCCTAAAACTGTGACATCGTGAAAGCAAAAATAAACTGTTTGTAACAGGTTAGTATCTCATTGATCCAAATTTTCTAAGTAGAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3