SE2850392

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9397
  • Sorghum bicolor
  • SE2850392
  • PIF/harbinger
  • To56
  • chromosome_7:2958163-2958443
  • TTA
  • AGAGCATCTTCAAGAGATTAGCCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT          C               ----AAT     TCAAATTTACTGATTTAGCTACTCTCTAAAATAGATTTGACAAAAAAATATTAGAGTACTCCAACAGACTCGGTAAAAGATGGCTAGTGAGGTAGGCTATCC
  AGAGCATCTT AAGAGATTAGCCAAA       AGTAG                                                                                                      
  |||||||||| |||||||||||||||       |||||                                                                                                      A
  TCTCGTAGAA TTCTCTAATCGGTTT       GATTT                                                                                                      
AT          A               AGTAAAA     CCATTTAAATCGATAACAACTTCCTTTTTGCAAAGGTTGTCTGAGACATTTGCTGAGAAGTTTAAATCATCGAGAGGTGGGTGGAATAAGCGAGAGATGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3