SE2810406

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9411
  • Sorghum bicolor
  • SE2810406
  • Tc1/Mariner
  • St12
  • chromosome_1:73539945-73540182
  • TA
  • TACTCCCTCCATCCATTTATT

Secondary structure and sequence

TSD    TIR
5'



3' 
                       -    TCATCTTACCGAAAAAAAATTCTCCAAGAATCGGAGTCATCTAGCTAGGGACCACTATTTTCACCTTTTCCCAAGCACATGCGGCTCCTCTC
  TACTCCCTCCATCCATTTATT GGAG                                                                                            
  ||||||||||||||||||||| ||||                                                                                            A
  ATGAGGGAGGTAGGTAAATAA TAGC                                                                                            
AT                     A    GTCAGTAAAATCCCAGTACGCGTCACTGGTTCCTCTTTAATTAAACCGGTCACTTTCCTCAACGTACGTCTGCCAACTTAATTAATCTGGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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