SE2850419

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9424
  • Sorghum bicolor
  • SE2850419
  • PIF/harbinger
  • To1
  • chromosome_3:62721245-62721493
  • TAA
  • AGGCCTTGTTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA            -C   ACCCCGAAATCCAAAAAGTTTTCAAGATTCCCCGTCACATCGAATCTTGCGGCACATGCATGAAGCATTAAATATAGACGAAAACAAAAACTAATTATACAGTTTA
  AGGCCTTGTTTA  TTC                                                                                                          
  ||||||||||||  |||                                                                                                           
  TCCGGAACAAAT  AGG                                                                                                          
AA            CA   CTTTTTTAAAGCCTAAAGCGATGACATCGTGAAAGCAAAAATAAACTGTTTATAACAGGTTAATACTTGATTGATCCTAGTTTTCTAAGCAGAGCGCTAAATGTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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