SE2810448

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9453
  • Sorghum bicolor
  • SE2810448
  • Tc1/Mariner
  • St20
  • chromosome_3:42498965-42499140
  • TA
  • TACTCCCTCCGTCCTAGTATATAAGGCGTAACCACTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                C     TTATT    T  TATAATATAAGGCGTGCTCTCTCACAAACATTAATGTAGTA
TACTCCCTCCGTCCTAGTATATAAGGCGTAAC ACTTT     CATG CC                                         
|||||||||||||||||||||||||||||||| |||||     |||| ||                                          
ATGAGGGAGGCAGGGTCATATATTCCGCGTTG TGGAG     ACCA AG                                         
                                A     -----    -  TTTCTGGTTCTTGCGTAAATTAAGAGAGAGTCGTGATCATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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