SE2810451

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9456
  • Sorghum bicolor
  • SE2810451
  • Tc1/Mariner
  • St8
  • chromosome_10:49999433-49999586
  • TA
  • TACTCCCTCCATTCCAAATTGTAAGACATTTTGGCTTTTCTAGATACATAGCTTTTGCTATGCACTTAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
         CA               -CA             --AGA   ATA C          --CAC      ATAC
TACTCCCTC  TTCCAAATTGTAAGA   TTTTGGCTTTTCT     TAC   G TTTTGCTATG     TTAGAT    
|||||||||  |||||||||||||||   |||||||||||||     |||   | ||||||||||     ||||||    A
ATGAGGGAG  GAGGTTTAATATTCT   AAAGCCGAAAAGA     ATG   C AAAATGATAT     GATCTG    
         AC               ACA             ACAAG   --A T          ATATA      CATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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