SE2850499

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9504
  • Sorghum bicolor
  • SE2850499
  • PIF/harbinger
  • To3
  • chromosome_6:53910764-53911012
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                TGATTTTTTT          - TACTGTAGCACTTTCGTTTTGATTTGACAATTATTGTCCAATCATAGACTAACTAGGCTCAAAAGATTCATCTCGCGATTTATAGACAAA
  AGGCCTTGTTTAGTTC          TTGGTTTTGG G                                                                                          
  ||||||||||||||||          |||||||||| |                                                                                           
  TCCGGAACAAATCAAG          TGGAGTTTTT G                                                                                          
AT                ----------          G TTTTTGAAAAGTTCTAAAGGACAGTGTAGCTTAGAACACCGTGTACGTACCTCGTAACTTATATCTGCTTTTGTTTTTGATTAACGTGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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