SE2850520

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9525
  • Sorghum bicolor
  • SE2850520
  • PIF/harbinger
  • To66
  • chromosome_1:9619775-9619923
  • TAT
  • GGGGCTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAT             TG  AGCATGGCCTGGGGGCGTTCACCCAGGCAGGTCCATCCAACCACCAGGCGCTCAA
   GGGGCTGTTTGGT  GC                                                       
   |||||||||||||  ||                                                       A
   CCCCGACAAGCCA  AG                                                       
TAT             --  ACTAAAGACTTGGACCACGTCCACGGACCCGGTCCGTCGAGGGGTCCGACAGCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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