SE2850532

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9537
  • Sorghum bicolor
  • SE2850532
  • PIF/harbinger
  • To26
  • chromosome_2:75910231-75910468
  • TTA
  • AGGCCTTGTTTAGTTCGCAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               C      ----------------AATTT     ---  - CCCGTCACATCGAATCTTGCGGCACATGCTTGGAGTATTAAATTTAGACGAAAACAAAAACTAATTACACAG
  AGGCCTTGTTTAGTT GCAAAA                     CAAGA   TT C                                                                        
  ||||||||||||||| ||||||                     |||||   || |                                                                         
  TCCGGAACAAATCAA CGTTTT                     TCGTG   GC A                                                                        
AT               C      AAAACCCTAAAACCCATGACA     AAA  A ACAAACACCATTTATAACAGGTTAGTATTTGATTAATCCCAGTTTTCTAAGTAGAGCACTAAATGTCCGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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