SE2830542

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9547
  • Sorghum bicolor
  • SE2830542
  • hAT
  • Hat34
  • chromosome_1:43758132-43758316
  • TTCCCCAG
  • AGCAGTAGCGGAGCCAGGAGCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCCCC      A         GGA   TTAAT       G CAATCTTCATTATACAAGACGTATTTAGCTAGTAAACTGCAGCGCTCTTCTTTG
      AGCAGT GCGGAGCCA   GCC     GAGCCTG G                                                      
      |||||| |||||||||   |||     ||||||| |                                                       
      TTGTCA CGCCTCGGT   CGG     GCCGGTG G                                                      
GACCCC      C         -GG   -----       - GGCCCGTCGGCCGGCCCGAACAGCCGCTAAAGACTTTCTTTTAAAAGAAACATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3