SE2850606

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9611
  • Sorghum bicolor
  • SE2850606
  • PIF/harbinger
  • To1
  • chromosome_1:64984207-64984455
  • TCA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TC                    AAGTTTTGAAAAAATGACACTGTAGCACTTTCGTTTTTATTTGACAAACATTGTTCAATCATGAAGTAACTAGGCTTAAAAGATTCGTCTCGCGATTTACAG
  AGGCCTTGTTTAGTTCCAAA                                                                                                      
  ||||||||||||||||||||                                                                                                      A
  TCCGGAACAAATCAAGTGGG                                                                                                      
AC                    GTTTTTGGTTTTTGAAAAATTCTAAGGGGCAGTGTAGCTTAGAACGCTGTGTACGTACCTCGTAATTTATATCTATTTTTATTTTTGATTAATGTGTCAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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